In order to evaluate quality of flight training in a fair and objective manner, a mathematical model for comprehensive evaluation of flight quality is proposed. According to the flight training program, the experience of senior pilots is studied, and a comprehensive evaluation structure hierarchy for flight quality and an evaluation index system for basic movement layers are established. The index weights are determined by subjective and objective comprehensive weighting, and quantitative analysis is performed for each sub-indicator. The example result proves that the evaluation result is reasonable, which facilitates the search for problems during training and improves the pilot’s operation level.